I am on a shared server and want to install the latest recommended stable version of drupal on an addon domain. First you should read this thread:
Drupal, drush and putty, fast and secure.
2. start PuTTY, Drush and navigate to the correct folder of the main domain.
Note: You may have another (folder) structure etc. on your site.
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cd /home/user/public_html/
source .bashrc
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pwd
drush pm-download --drupal-project-rename=youraddondomain.com drupal
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cd /home/user/public_html/youraddondomain.com
drush site-install \
--db-url=mysql://database_user:databasepassword@localhost/databasename\
--site-name=YourAddOnDomain.com \
standard
More specifically, you may find more information on the site-install command.
6. Litterature
http://www.packtpub.com/drush-drupal-co ... guide/book